PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.12G088400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 213aa    MW: 24058.2 Da    PI: 6.9802
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.12G088400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.6e-122171355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                  HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                         +  + +E++RR+++++ f++L +llPk+   +sk  l   + + +A++YIksL+
  Manes.12G088400.1.p 21 TERKVIEKNRRNQMKTLFSNLNSLLPKQ---SSKEaLPLPDQVDEAINYIKSLE 71
                         56789**********************8...56666****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-121893IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.7691870IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-112090IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-82271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-42476IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MEMNRSKSKT ATFHSTSATK TERKVIEKNR RNQMKTLFSN LNSLLPKQSS KEALPLPDQV  60
DEAINYIKSL EEKLKKSKEK KESLSGRKRS FSNFVSSFES ASNLVAPKLE IREMGSSLQI  120
ILISGLDNQF IFYDIIHILE DEGVEIPNAS FSVSGNSIFH VVHAQMKESD FSYGAAKVTE  180
RLNRYINGSA SELELGPELW DFNDLNPETW VF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012088267.11e-109PREDICTED: transcription factor bHLH36-like
TrEMBLA0A067JJH01e-109A0A067JJH0_JATCU; Uncharacterized protein
STRINGGLYMA12G12880.15e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-33bHLH family protein